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\n \n\n \n \n Angerer, L. M., Yaguchi, S., Angerer, R. C., & Burke, R. D.\n\n\n \n \n \n \n \n The evolution of nervous system patterning: insights from sea urchin development.\n \n \n \n \n\n\n \n\n\n\n Development, 138(17): 3613–3623. September 2011.\n \n\n\n\n
\n\n\n\n \n \n \"ThePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{angerer_evolution_2011,\n\ttitle = {The evolution of nervous system patterning: insights from sea urchin development},\n\tvolume = {138},\n\tissn = {1477-9129, 0950-1991},\n\tshorttitle = {The evolution of nervous system patterning},\n\turl = {https://journals.biologists.com/dev/article/138/17/3613/44626/The-evolution-of-nervous-system-patterning},\n\tdoi = {10.1242/dev.058172},\n\tabstract = {Recent studies of the sea urchin embryo have elucidated the mechanisms that localize and pattern its nervous system. These studies have revealed the presence of two overlapping regions of neurogenic potential at the beginning of embryogenesis, each of which becomes progressively restricted by separate, yet linked, signals, including Wnt and subsequently Nodal and BMP. These signals act to specify and localize the embryonic neural fields – the anterior neuroectoderm and the more posterior ciliary band neuroectoderm – during development. Here, we review these conserved nervous system patterning signals and consider how the relationships between them might have changed during deuterostome evolution.},\n\tlanguage = {en},\n\tnumber = {17},\n\turldate = {2021-07-27},\n\tjournal = {Development},\n\tauthor = {Angerer, Lynne M. and Yaguchi, Shunsuke and Angerer, Robert C. and Burke, Robert D.},\n\tmonth = sep,\n\tyear = {2011},\n\tpages = {3613--3623},\n}\n\n
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\n Recent studies of the sea urchin embryo have elucidated the mechanisms that localize and pattern its nervous system. These studies have revealed the presence of two overlapping regions of neurogenic potential at the beginning of embryogenesis, each of which becomes progressively restricted by separate, yet linked, signals, including Wnt and subsequently Nodal and BMP. These signals act to specify and localize the embryonic neural fields – the anterior neuroectoderm and the more posterior ciliary band neuroectoderm – during development. Here, we review these conserved nervous system patterning signals and consider how the relationships between them might have changed during deuterostome evolution.\n
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\n \n\n \n \n Endo, T., Ueno, K., Yonezawa, K., Mineta, K., Hotta, K., Satou, Y., Yamada, L., Ogasawara, M., Takahashi, H., Nakajima, A., Nakachi, M., Nomura, M., Yaguchi, J., Sasakura, Y., Yamasaki, C., Sera, M., Yoshizawa, A. C., Imanishi, T., Taniguchi, H., & Inaba, K.\n\n\n \n \n \n \n \n CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality.\n \n \n \n \n\n\n \n\n\n\n Nucleic Acids Research, 39(Database): D807–D814. January 2011.\n \n\n\n\n
\n\n\n\n \n \n \"CIPROPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{endo_cipro_2011,\n\ttitle = {{CIPRO} 2.5: \\textit{{Ciona} intestinalis} protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality},\n\tvolume = {39},\n\tissn = {0305-1048, 1362-4962},\n\tshorttitle = {{CIPRO} 2.5},\n\turl = {https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkq1144},\n\tdoi = {10.1093/nar/gkq1144},\n\tlanguage = {en},\n\tnumber = {Database},\n\turldate = {2021-07-27},\n\tjournal = {Nucleic Acids Research},\n\tauthor = {Endo, T. and Ueno, K. and Yonezawa, K. and Mineta, K. and Hotta, K. and Satou, Y. and Yamada, L. and Ogasawara, M. and Takahashi, H. and Nakajima, A. and Nakachi, M. and Nomura, M. and Yaguchi, J. and Sasakura, Y. and Yamasaki, C. and Sera, M. and Yoshizawa, A. C. and Imanishi, T. and Taniguchi, H. and Inaba, K.},\n\tmonth = jan,\n\tyear = {2011},\n\tpages = {D807--D814},\n}\n\n
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\n \n\n \n \n Yaguchi, S., Yaguchi, J., Wei, Z., Jin, Y., Angerer, L. M., & Inaba, K.\n\n\n \n \n \n \n \n Fez function is required to maintain the size of the animal plate in the sea urchin embryo.\n \n \n \n \n\n\n \n\n\n\n Development, 138(19): 4233–4243. October 2011.\n \n\n\n\n
\n\n\n\n \n \n \"FezPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{yaguchi_fez_2011,\n\ttitle = {Fez function is required to maintain the size of the animal plate in the sea urchin embryo},\n\tvolume = {138},\n\tissn = {1477-9129, 0950-1991},\n\turl = {https://journals.biologists.com/dev/article/138/19/4233/44569/Fez-function-is-required-to-maintain-the-size-of},\n\tdoi = {10.1242/dev.069856},\n\tabstract = {Partitioning ectoderm precisely into neurogenic and non-neurogenic regions is an essential step for neurogenesis of almost all bilaterian embryos. Although it is widely accepted that antagonism between BMP and its inhibitors primarily sets up the border between these two types of ectoderm, it is unclear how such extracellular, diffusible molecules create a sharp and precise border at the single-cell level. Here, we show that Fez, a zinc finger protein, functions as an intracellular factor attenuating BMP signaling specifically within the neurogenic region at the anterior end of sea urchin embryos, termed the animal plate. When Fez function is blocked, the size of this neurogenic ectoderm becomes smaller than normal. However, this reduction is rescued in Fez morphants simply by blocking BMP2/4 translation, indicating that Fez maintains the size of the animal plate by attenuating BMP2/4 function. Consistent with this, the gradient of BMP activity along the aboral side of the animal plate, as measured by pSmad1/5/8 levels, drops significantly in cells expressing Fez and this steep decline requires Fez function. Our data reveal that this neurogenic ectoderm produces an intrinsic system that attenuates BMP signaling to ensure the establishment of a stable, well-defined neural territory, the animal plate.},\n\tlanguage = {en},\n\tnumber = {19},\n\turldate = {2021-07-27},\n\tjournal = {Development},\n\tauthor = {Yaguchi, Shunsuke and Yaguchi, Junko and Wei, Zheng and Jin, Yinhua and Angerer, Lynne M. and Inaba, Kazuo},\n\tmonth = oct,\n\tyear = {2011},\n\tpages = {4233--4243},\n}\n\n
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\n Partitioning ectoderm precisely into neurogenic and non-neurogenic regions is an essential step for neurogenesis of almost all bilaterian embryos. Although it is widely accepted that antagonism between BMP and its inhibitors primarily sets up the border between these two types of ectoderm, it is unclear how such extracellular, diffusible molecules create a sharp and precise border at the single-cell level. Here, we show that Fez, a zinc finger protein, functions as an intracellular factor attenuating BMP signaling specifically within the neurogenic region at the anterior end of sea urchin embryos, termed the animal plate. When Fez function is blocked, the size of this neurogenic ectoderm becomes smaller than normal. However, this reduction is rescued in Fez morphants simply by blocking BMP2/4 translation, indicating that Fez maintains the size of the animal plate by attenuating BMP2/4 function. Consistent with this, the gradient of BMP activity along the aboral side of the animal plate, as measured by pSmad1/5/8 levels, drops significantly in cells expressing Fez and this steep decline requires Fez function. Our data reveal that this neurogenic ectoderm produces an intrinsic system that attenuates BMP signaling to ensure the establishment of a stable, well-defined neural territory, the animal plate.\n
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\n \n\n \n \n Yoshiyama-Yanagawa, T., Enya, S., Shimada-Niwa, Y., Yaguchi, S., Haramoto, Y., Matsuya, T., Shiomi, K., Sasakura, Y., Takahashi, S., Asashima, M., Kataoka, H., & Niwa, R.\n\n\n \n \n \n \n \n The Conserved Rieske Oxygenase DAF-36/Neverland Is a Novel Cholesterol-metabolizing Enzyme.\n \n \n \n \n\n\n \n\n\n\n Journal of Biological Chemistry, 286(29): 25756–25762. July 2011.\n \n\n\n\n
\n\n\n\n \n \n \"ThePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 11 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
\n 
@article{yoshiyama-yanagawa_conserved_2011,\n\ttitle = {The {Conserved} {Rieske} {Oxygenase} {DAF}-36/{Neverland} {Is} a {Novel} {Cholesterol}-metabolizing {Enzyme}},\n\tvolume = {286},\n\tissn = {00219258},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0021925819485657},\n\tdoi = {10.1074/jbc.M111.244384},\n\tlanguage = {en},\n\tnumber = {29},\n\turldate = {2021-07-27},\n\tjournal = {Journal of Biological Chemistry},\n\tauthor = {Yoshiyama-Yanagawa, Takuji and Enya, Sora and Shimada-Niwa, Yuko and Yaguchi, Shunsuke and Haramoto, Yoshikazu and Matsuya, Takeshi and Shiomi, Kensuke and Sasakura, Yasunori and Takahashi, Shuji and Asashima, Makoto and Kataoka, Hiroshi and Niwa, Ryusuke},\n\tmonth = jul,\n\tyear = {2011},\n\tpages = {25756--25762},\n}\n\n
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